Index

D

define_PCA_model() (mpca.pcamodel.pcamodel method)

G

get_pop_superpop_list() (in module mpca.utils.datahandling)

I

ind_pca_merge() (in module mpca.estimate)

K

known_data_regression() (in module mpca.estimate)

L

load_from_h5() (mpca.pcamodel.pcamodel method)

load_from_SMARTPCA() (mpca.pcamodel.pcamodel method)

M

mpca.estimate (module)

mpca.pcamodel (module) mpca.utils.datahandling (module)

N

normalize_genos_EIGENSTRATstyle() (in module mpca.utils.datahandling)

P

pcamodel (class in mpca.pcamodel)

projection_to_model_plane() (in module mpca.estimate)

R

read_from_EIGENSTRAT() (in module mpca.utils.datahandling)

read_h5() (in module mpca.utils.datahandling) remove_values() (in module mpca.utils.datahandling)

S

save_to_h5() (mpca.pcamodel.pcamodel method)

T

trimmed_score_regression() (in module mpca.estimate)

W

write_h5() (in module mpca.utils.datahandling)